Infer transcript ranges for a reference genome

If trans_ranges is supplied, it is returned unchanged. Otherwise, returns the shipped transcript-ranges table for the given reference genome (GRCh37 / GRCh38 / GRCm38).

Usage

infer_trans_ranges(ref_genome, trans_ranges = NULL)

Arguments

ref_genome

A BSgenome object or a character identifier accepted by normalize_genome_arg().

trans_ranges

Optional user-supplied transcript ranges.

Value

A data.table of transcript ranges, or NULL if no shipped table is available and none was supplied.