Write a mutational-spectrum catalog to a file — write

Writes catalog in ICAMS-native CSV format (the only format currently supported for writing). The row-header columns that precede the sample columns are taken from the shipped catalog.row.headers object for the catalog's type.

Usage

write_catalog(
  catalog,
  file,
  format = c("ICAMS", "SigProfiler", "COSMIC"),
  sep = ","
)

Arguments

catalog: A catalog (see as_catalog()).
file: Output path.
format: Output format. Currently only "ICAMS" is supported; "SigProfiler" and "COSMIC" error with an informative message.
sep: Column separator. Defaults to "," for ICAMS format.

Value

file invisibly.