Return catalog row orders for all supported catalog types

Returns a named list containing the canonical row ordering for each catalog type. These are used for validation and ordering of mutation catalogs. The result is cached after the first call.

Usage

catalog_row_order()

Value

A named list with elements: SBS96, SBS192, SBS288, SBS1536, DBS78, DBS136, DBS144, ID (83-category COSMIC indels), ID166, ID89, ID476.

Examples

cro <- catalog_row_order()
head(cro$SBS96)
#> [1] "ACAA" "ACCA" "ACGA" "ACTA" "CCAA" "CCCA"
length(cro$DBS78)
#> [1] 78